Best payroll software in the Philippines companies is crucial for purposes of government compliance, maintaining employee satisfaction, and streamlining financial procedures. Payroll software allows for easy automatic calculation of salaries, tax withholdings, mandatory contributions (SSS, PhilHealth, Pag-IBIG), and other personnel-related tasks, avoiding errors and administrative tasks. Business proprietors, HR professionals, finance teams, and even freelancers with various clients can be assisted by the right payroll software.
This top 15 list of best payroll software in the Philippines was selected based on key factors such as ease of use, adherence to local labor laws, automation capabilities, integration, cost, and scalability. These solutions cater to a broad spectrum of users, from small enterprises and startups to large enterprises with complex payroll needs. Whether you’re an HR director in need of an integrated payroll and HR solution, an accountant needing simple tax filing functionality, or an owner who simply wants to simplify salary processing, these payroll software solutions provide the speed and precision needed for today’s payroll management.
Criteria for Selecting the Best Payroll Software in the Philippines
Choosing the most suitable payroll software is essential for businesses to deliver accuracy, compliance, and efficiency in salary processing. The following were utilized to choose the best payroll software in the Philippines:
- Philippine Labor Laws Compliance: Software must be able to automatically calculate government-mandated deductions such as SSS, PhilHealth, Pag-IBIG, and withholding taxes, thus ensuring business compliance with local laws.
- Automation and Accuracy: Efficient payroll software should be capable of automating the computation of payrolls, payment of wages, computation of tax, and handling benefits to save time and minimize errors.
- Integration Support: Payroll software should be capable of integrating with other business solutions such as HR solutions, accounting packages, attendance packages, and banking packages for increased productivity of the function.
- User Experience and Simplicity: There must be a clean, simple interface that can easily be used by HR professionals, entrepreneurs, and finance teams without a requirement for specialized training.
- Scalability and Configurability: The payroll system has to be scalable to serve different business sizes from small startup firms to giant companies and should be configurable enough to support differing payroll setups.
- Employee Self-Service Portal: A reliable payroll software must provide employees with online access to their payslips, tax notices, leave balances, and other payroll data through an online portal or mobile app, which is secure.
- Cost-Effectiveness: It must be reasonably priced with transparent cost and scalable cost plans for any business with no additional fee.
- Security and Data Protection: As the payroll data provided consists of sensitive data, strong encryption, role-based access control, and cloud-safe storage need to be highlighted as key features.
- Customer Support and Uptime: Timely and proper customer support via live chat, email, and phone is necessary for efficiently handling payroll errors. Minimal or zero downtime for the software has to be provided.
- Reporting and Analytics: Extensive reporting capability enables firms to monitor payroll costs, create tax reports, and examine the cost of the workforce to enable improved budget planning.
By reviewing payroll software on these features, organizations can choose the most appropriate solution that maximizes efficiency, compliance, and employee satisfaction.
Comparison Between Best Payroll Software in the Philippines
Here is a comparison table for the best payroll software in the Philippines based on features, pricing, use cases, and official websites:
| Software | Key Features | Pricing | Use Cases | Website |
| HashMicro Payroll Software | Automated payroll, tax compliance, integration with HR & accounting | Custom pricing | SMEs & Enterprises | hashmicro.com |
| Payroll.PH | Local compliance, automated deductions, payslip generation | Custom pricing | Small & medium businesses | payroll.ph |
| Sprout Solutions | Payroll automation, timekeeping, analytics, mobile app | Custom pricing | SMEs & large enterprises | sprout.ph |
| JeonSoft Payroll Suite (JPS) | Government compliance, attendance tracking, bank integration | Custom pricing | Enterprises & corporations | jeonsoft.com |
| QuickBooks Online | Payroll & accounting integration, tax filing, direct deposit | Starts at $18.50/month | Small businesses & freelancers | quickbooks.intuit.com |
| ADP Cloud-Based Payroll System | Multi-country payroll, compliance, HR integration | Custom pricing | Large enterprises & global companies | adp.com |
| GreatDay HR | Payroll, employee self-service, mobile access, compliance | Custom pricing | SMEs & startups | greatdayhr.com |
| Deel | Global payroll, contract management, tax compliance | Starts at $49/month | Remote teams & global businesses | deel.com |
| factoHR | Attendance integration, payroll automation, mobile payroll | Custom pricing | SMEs & enterprises | factohr.com |
| Breathe | Payroll, HR tools, benefits tracking, compliance | Starts at £22/month | Small & medium businesses | breathehr.com |
| ZingHR | AI-driven payroll, biometric attendance, HR analytics | Custom pricing | Enterprises & HR teams | zinghr.com |
| QNE Payroll Software | Government compliance, payroll processing, accounting integration | Custom pricing | Local businesses & SMEs | qne.com.ph |
| peopleHum | AI-powered payroll, employee engagement, automation | Custom pricing | Enterprises & remote teams | peoplehum.com |
| OneJAF | Payroll automation, employee self-service, HR features | Custom pricing | SMEs & large companies | onejaf.com |
| PHP Payroll | Customizable payroll, compliance, direct bank transfer | Custom pricing | SMEs & enterprises | phppayroll.com |
List of 15 Best Payroll Software in the Philippines
1. HashMicro Payroll Software
HashMicro Payroll Software is a powerful payroll software for Philippine companies. It streamlines salary computation, tax withholdings, and employee benefits and adheres to the laws of the land. It is part of accounting and human resource management software, reducing errors and manual interventions. It has customizable payroll processing, automatic payslips, and bank integration for effortless payment of wages. HashMicro additionally provides analytics and reporting features for firms to be able to track employee compensation habits and labor expenses. Its cloud solution offers the safety of the data and anytime-anywhere access, making it an efficient measure for firms across different sizes
Key Features:
- Customizable payslip templates
- Automated tax compliance
- Integration with accounting and HR systems
- Employee self-service portal
Pros:
- Enhances accuracy and efficiency in payroll processing
- Ensures compliance with Philippine tax laws
Cons:
- Pricing details are not publicly disclosed
- May require training for new users
Pricing:
Contact HashMicro for a customized quote.
Who Should Use It:
Medium to large enterprises seeking a comprehensive payroll solution with integration capabilities.
2. Payroll.PH
Payroll.PH is one of the locally developed payroll software in the Philippines that is tailor-made to suit the requirements of Philippine companies. It simplifies the processing of payrolls through the ease of tax computation, deductions, and government contribution compliance such as SSS, PhilHealth, and Pag-IBIG. The product has adjustable pay structures, attendance management, and integration with accounting software.
Payroll.PH has a user-friendly interface that makes it easy for HR teams to generate payslips, process payroll, and disburse salaries on time. Its cloud-based platform allows businesses to do payroll processing outside the office, giving them the flexibility and speed in processing the remuneration of employees.
Key Features:
- HRIS and attendance monitoring
- Government forms and reports compliance
- Optimized for web access
- Automatic payroll computation
Pros:
- Affordable and easy to use
- Compliant with Philippine labor and tax laws
Cons:
- Limited advanced features compared to larger payroll software
- May not be ideal for multinational companies
Pricing:
Contact Payroll.PH for pricing details.
Who Should Use It:
Small to medium-sized businesses looking for an affordable, local payroll solution.
3. Sprout Solutions
Sprout Solutions is one of the leading Philippines HR and payroll software that simplifies workforce management. Sprout Solutions’ payroll module offers automation of salary, tax withholding, and mandatory contribution calculations to assist in compliance requirements. The product easily integrates time and attendance as well as HR applications to offer accurate payroll computation based on attendance. Sprout Solutions offers features like auto payslips, bank transfers, and live reporting. The analytical aspect of the system helps businesses reduce payroll costs and ease the financial planning process. With its cloud infrastructure, information is stored securely in storage with ease of accessibility, and hence the most desired platform for small, medium, to large-scale companies.
Key Features:
- Automated payroll and tax computation
- Government compliance reports (SSS, PhilHealth, Pag-IBIG, BIR)
- Employee self-service portal
- Integration with HR and attendance systems
Pros:
- Localized for Philippine labor and tax regulations
- Scalable for small to large enterprises
Cons:
- Pricing can be high for small businesses
- Requires internet access for cloud functionality
Pricing:
Custom pricing based on business size and needs.
Who Should Use It:
Businesses of all sizes looking for a robust, Philippine-specific payroll and HR solution.
4. JeonSoft Payroll Suite (JPS)
JeonSoft Payroll Suite (JPS) is an all-inclusive payroll management software for Philippine businesses. It computes payroll, tax deductions, and government compliance such as SSS, PhilHealth, and Pag-IBIG contributions automatically. JPS accommodates different payroll structures such as hourly, monthly, and commission-based wages. The software features attendance integration, customizable pay rates, and real-time reporting. It also features direct bank transfer functionality for easy salary disbursement. JeonSoft Payroll Suite ensures accuracy and efficiency when processing payroll, thus being a credible solution for businesses seeking to streamline payroll operations while ensuring labor law compliance.
Key Features:
- Automated payroll processing
- Government compliance and tax calculations
- Multi-company and multi-branch support
- Integration with biometric attendance systems
Pros:
- Strong compliance with Philippine tax laws
- Can handle complex payroll requirements
Cons:
- Interface can be outdated compared to newer solutions
- Requires training for optimal use
Pricing:
Custom pricing available upon request.
Who Should Use It:
Medium to large businesses needing advanced payroll and tax management features.
5. QuickBooks Online
QuickBooks Online is a globally respected accounting and payroll system with features specially designed for Philippine businesses. It calculates payroll, tax, and employee benefits automatically and gives the assurance of compliance with Philippine labor laws. QuickBooks Online works seamlessly with accounting and HR software, enabling businesses to control payroll expenses. It provides real-time monitoring of employee wages, deductions, and contributions, along with auto-payslip generation. Its cloud platform offers remote access, making it possible for payroll management to be done from anywhere. Its simple interface and strong reporting capabilities make it the first preference of small and medium-sized businesses.
Key Features:
- Payroll automation and tax filing
- Expense tracking and financial reports
- Multi-user collaboration
- Integration with bank accounts and payment systems
Pros:
- Ideal for businesses looking for both payroll and accounting features
- Cloud-based with mobile access
Cons:
- May require customization for Philippine payroll compliance
- Subscription costs can be high for small businesses
Pricing:
Starts at around $18.50/month, with additional payroll costs.
Who Should Use It:
Small to medium businesses looking for a payroll solution integrated with accounting.
6. ADP Cloud-Based Payroll System
ADP is a well-proven global payroll solution offering a cloud-based payroll system that is customized for Philippine businesses. It processes payroll, tax filing, and government-mandated contributions like SSS, PhilHealth, and Pag-IBIG automatically. ADP features sophisticated capabilities such as multi-country payroll processing, employee self-service portals, and integration with HR and accounting systems. Its cloud-based secure infrastructure provides protection and accessibility of data from anywhere. ADP’s analytics solutions enable companies to monitor payroll spending and maximize labor costs. The automated nature of the system minimizes errors and administrative burdens, which makes it a suitable payroll solution for businesses of all sizes.
Key Features:
- Automated payroll and tax calculations
- Compliance with local labor laws
- Employee self-service and reporting tools
- Multi-country payroll support
Pros:
- Reliable and scalable for multinational businesses
- Strong security and compliance features
Cons:
- Higher pricing compared to local competitors
- Can be complex to set up for small businesses
Pricing:
Custom pricing based on business size and needs.
Who Should Use It:
Large enterprises and multinational companies needing a secure, global payroll system.
7. GreatDay HR
GreatDay HR is a complete HR and payroll software in the Philippines businesses. It streamlines payroll processing by automating salary calculations, tax withholdings, and statutory contribution compliance. The software also synchronizes with attendance tracking systems to provide correct payroll calculations based on working hours. GreatDay HR provides an employee self-service portal for payslips, leave applications, and benefits. Its mobile-accessible interface provides payroll management anywhere, anytime. With strong reporting and analytics capabilities, companies can track payroll costs effectively. The cloud platform provides safe data storage and effortless access, so it’s an ideal solution for HR teams.
Key Features:
- Automated payroll and tax computation
- Employee attendance and leave tracking
- Employee self-service portal
- Mobile accessibility
Pros:
- Affordable and easy to use
- Strong employee management features
Cons:
- Limited advanced payroll customization
- Some features may require additional costs
Pricing:
Subscription-based pricing, varies by business size.
Who Should Use It:
Small and medium businesses looking for a user-friendly payroll and HR solution.
8. Deel
Deel is an international payroll and compliance platform that helps businesses with international and remote employees, including the Philippines, make payroll easier. It streamlines salary payments, tax withholdings, and regulatory compliance across multiple jurisdictions. Deel offers contract creation, benefits management, and tax filing to help businesses comply with local regulations. It integrates with key HR and accounting systems, providing a hassle-free payroll experience. Deel’s global payment infrastructure makes it possible for salary payment across different currencies. With a reliable, cloud-hosted system, companies can optimize payroll operations to concentrate on business growth and development.
Key Features:
- Automated payroll for global teams
- Compliance with local labor laws in multiple countries
- Secure contract and tax document management
- Integration with accounting and HR systems
Pros:
- Ideal for remote and international workforce management
- Strong compliance and security features
Cons:
- Not focused on Philippine-specific payroll needs
- Pricing may be high for small businesses
Pricing:
Starts at around $49 per contractor per month.
Who Should Use It:
Companies with remote teams or international employees.
9. factoHR
factoHR is a payroll software that runs on the cloud and assists organizations in the Philippines in automating payroll computation, tax withholding, and government regulations. It also integrates with leave and attendance systems to guarantee precise payroll processing. factoHR supports direct bank transfers, automated payslips, and real-time payroll analytics. The self-service portal of the software enables employees to view their salary information, tax reports, and benefits. Its mobile support feature facilitates payroll management remotely. With strong security measures and adherence to local labor regulations, factoHR is an attractive payroll solution for organizations seeking to automate their payroll processes.
Key Features:
- Automated payroll processing
- Tax and compliance management
- Employee self-service portal
- Mobile app for payroll access
Pros:
- Affordable and scalable for SMEs
- Strong compliance with local labor laws
Cons:
- Some features may require additional payment
- UI can be complex for new users
Pricing:
Custom pricing based on business size.
Who Should Use It:
SMEs looking for an affordable payroll and HR solution.
10. Breathe
Breathe is an easy-to-use HR and payroll solution for small and medium-sized enterprises in the Philippines. It streamlines payroll processing by performing salary calculations, tax withholdings, and mandatory contributions automatically. Breathe can be integrated with time and attendance systems for proper payroll computation. The system has an employee self-service platform for accessing payslips, leaves, and benefits. Breathe features cloud-based technology to enable remote management of payroll by HR teams. Breathe also provides reporting and analytics facilities for monitoring payroll costs. Its user-friendly interface and automation capabilities make it the perfect solution for companies looking for effective payroll management.
Key Features:
- Payroll automation and tax calculations
- Employee leave and attendance tracking
- Document storage and compliance tools
- Integration with accounting software
Pros:
- Simple and easy to use for small businesses
- Affordable pricing
Cons:
- Limited advanced payroll features
- Not as customizable as enterprise solutions
Pricing:
Starts at around £22/month per user.
Who Should Use It:
Small businesses looking for a simple payroll and HR solution.
11. ZingHR
ZingHR is payroll and HR software available online to facilitate the processing of the payroll of organizations in the Philippines. It automates payroll calculations, deductibles, and labor law compliances. It is integrated with biometric-based attendance systems to provide precise payroll calculations. ZingHR provides amenities of direct bank transfers, automated payslips, and real-time payroll analytics. Salary details, tax statements, and allowances can be viewed by the employees on a self-service platform. The mobile-enabled interface of the software supports payroll management from any location. Powered with robust security features and AI-driven insights, ZingHR is a secure payroll solution for businesses.
Key Features:
- AI-driven payroll automation
- Statutory compliance with Philippine labor laws
- Employee self-service portal
- Performance and attendance management
Pros:
- AI-driven analytics for payroll and HR decisions
- Scalable for growing businesses
Cons:
- Can be complex for smaller businesses
- Pricing details are not publicly disclosed
Pricing:
Custom pricing available upon request.
Who Should Use It:
Medium to large businesses looking for an AI-powered HR and payroll solution.
12. QNE Payroll Software
QNE Payroll Software is a local payroll solution programmed to fit organizations that do business in the Philippines. It carries out payroll calculations, tax deductions, and regulatory deductions for compliance with government policy. The application is integrated into accounting packages as well as attendance management systems to provide accurate control of payroll. QNE allows tailored payroll regimes, automated payslips, and direct banking transfers. The cloud solution it provides provides secure data storage as well as remote access. It features real-time reporting and analytics on payroll to ensure that companies maximize their payroll spending. QNE Payroll Software is a favorite among HR departments in various industries due to its simplicity.
Key Features:
- Automated payroll processing
- Compliance with Philippine tax laws (SSS, Pag-IBIG, BIR, PhilHealth)
- Customizable reports and payslips
- Integration with accounting systems
Pros:
- Tailored for Philippine businesses
- User-friendly interface
Cons:
- Limited features for multinational companies
- No free version available
Pricing:
Custom pricing based on business size.
Who Should Use It:
Small to medium businesses looking for a localized payroll system.
13. peopleHum
peopleHum is an artificial intelligence-based HR and payroll software that helps automate payroll processing, tax calculation, and statutory contribution compliance in the Philippines. The software has integration with HR and accounting software for smooth payroll processing. peopleHum provides an employee self-service portal for payslips, tax reports, and leave balance access. Its cloud-based architecture supports remote and secure payroll processing. The AI-powered intelligence of the platform enables companies to maximize payroll spending and manage manpower. With auto-execution of processes and an intuitive user interface, peopleHum is a streamlined payroll solution for corporate clients who desire to optimize HR operations.
Key Features:
- AI-powered payroll processing
- Employee engagement and performance tracking
- Cloud-based document management
- Compliance with labor laws
Pros:
- AI-driven insights for better workforce management
- Mobile-friendly interface
Cons:
- Some advanced features require higher-tier pricing
- Not exclusively designed for the Philippines
Pricing:
Contact peopleHum for pricing details.
Who Should Use It:
Businesses looking for an AI-powered HR and payroll solution with engagement tools.
14. OneJAF
OneJAF is an HR and payroll software solution for Philippine companies. It pays payroll, computes taxes, and complies with the government. The software is coupled with attendance and accounting systems to accurately calculate salaries. OneJAF provides an employee self-service portal for viewing payslips and administering benefits. Its cloud-based technology allows payroll management remotely. OneJAF also features real-time analytics and reporting on payroll to help companies optimize payroll spend. With automated features and an intuitive interface, OneJAF is an end-to-end payroll solution for companies of all sizes.
Key Features:
- Automatic payroll computation
- Tax and benefits compliance (BIR, SSS, PhilHealth, Pag-IBIG)
- Employee self-service portal
- Attendance and leave management
Pros:
- Designed specifically for Philippine businesses
- Simple and easy to use
Cons:
- Limited advanced HR features
- Not ideal for multinational companies
Pricing:
Custom pricing based on company size and needs.
Who Should Use It:
Small and medium businesses in the Philippines looking for a localized payroll solution.
15. PHP Payroll
PHP Payroll is a cloud payroll management system designed specifically for Philippine corporations. It automatically calculates salaries, tax deductions, and statutory contributions. It integrates with accounting systems and HR to provide payroll processing on autopilot. PHP Payroll provides customizable pay structures, automated payslips, and bank deposits by direct debit. Employees can access salary details and tax reports through its self-service portal. The payroll software offers real-time payroll analytics, enabling firms to track payroll expenditures. PHP Payroll, with its advanced security features and adherence to labor laws, is a favorite among firms seeking productive payroll solutions.
Key Features:
- Automated payroll processing
- Employee leave and attendance tracking
- Compliance with Philippine labor laws
- Customizable reports and payslips
Pros:
- Easy to use with minimal setup
- Localized for Philippine businesses
Cons:
- Limited scalability for large enterprises
- Fewer integrations compared to international software
Pricing:
Custom pricing available upon request.
Who Should Use It:
Small to medium-sized businesses looking for a simple and localized payroll solution.
Conclusion
Choosing the proper payroll software in the Philippines for businesses is crucial to maintain hassle-free salary processing, government compliance, and effective workforce management. Of the best payroll software firms, Sprout Solutions is a full-cycle HR and payroll solution best for businesses requiring automation and insights. QuickBooks Online is also suggested for small businesses and freelancers who prefer the ease of payroll and accounting integration. JeonSoft Payroll Suite is most suited for big corporations that need to have their payroll software highly customized, and Deel is most suited for global and remote teams.
SMEs and startups would be able to utilize GreatDay HR and Payroll.PH, low-budget and simple payroll and HR software with the least features required. Those who enjoy excellent compliance and government-mandated deductions would be more than willing to employ QNE Payroll Software or factoHR to accurately calculate taxes. Organizations with the need for AI-driven analytics and automation will opt to have ZingHR or peopleHum installed for intelligent payroll management capabilities.
Lastly, the best payroll software will depend on the unique needs of the firm. Small enterprises need to embrace cheap and lightweight solutions, but big firms need scalable platforms that are feature-heavy. International organizations need payroll software with multi-national compliance. When companies choose appropriate payroll software, they can be more efficient, decrease errors, and increase workers’ satisfaction levels, which eventually will make managing payroll easier in the long run.
FAQs
1. What is the best payroll software in the Philippines for small businesses?
QuickBooks Online and Payroll.PH are the best payroll software in the Philippines for small businesses. They have simple interfaces, automated payroll processing, and local tax compliance at a reasonable price.
2. Which one provides Philippine labor law compliance?
JeonSoft Payroll Suite, QNE Payroll Software, and Sprout Solutions are also known to have robust compliance capabilities. They automatically compute and process mandated government contributions such as SSS, PhilHealth, Pag-IBIG, and withholding tax.
3. What is the best payroll software in the Philippines for businesses with remote employees?
Deel is the ideal payroll software for businesses with international or remote workers. It provides multi-country payroll, contract management, and global tax compliance.
4. How is payroll software priced in the Philippines?
Pricing depends on company size and features. Some suppliers, such as QuickBooks Online, begin from about $15/month, and others, such as Sprout Solutions and JeonSoft Payroll Suite, have custom prices based on needs. Most providers have free demos or trials.
